CCRL1

Protein-coding gene in the species Homo sapiens
ACKR4
Identifiers
AliasesACKR4, CC-CKR-11, CCBP2, CCR-11, CCR10, CCR11, CCRL1, CCX CKR, CCX-CKR, CKR-11, PPR1, VSHK1, atypical chemokine receptor 4
External IDsOMIM: 606065 MGI: 2181676 HomoloGene: 49474 GeneCards: ACKR4
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for ACKR4
Genomic location for ACKR4
Band3q22.1Start132,597,270 bp[1]
End132,618,967 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for ACKR4
Genomic location for ACKR4
Band9|9 F1Start103,961,356 bp[2]
End104,004,132 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • duodenum

  • ascending aorta

  • gallbladder

  • subcutaneous adipose tissue

  • right coronary artery

  • Achilles tendon

  • skin of abdomen

  • pituitary gland

  • left ventricle

  • lung
Top expressed in
  • lip

  • body of femur

  • belly cord

  • esophagus

  • calvaria

  • thymus

  • morula

  • zone of skin

  • pharynx

  • duodenum
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • signal transducer activity
  • chemokine binding
  • scavenger receptor activity
  • G protein-coupled receptor activity
  • protein binding
  • chemokine receptor activity
  • C-C chemokine receptor activity
  • C-C chemokine binding
Cellular component
  • recycling endosome
  • plasma membrane
  • membrane
  • endosome
  • integral component of membrane
  • early endosome
  • integral component of plasma membrane
  • external side of plasma membrane
Biological process
  • receptor-mediated endocytosis
  • signal transduction
  • immune response
  • chemotaxis
  • G protein-coupled receptor signaling pathway
  • chemokine-mediated signaling pathway
  • positive regulation of cytosolic calcium ion concentration
  • calcium-mediated signaling
  • cell chemotaxis
  • vesicle-mediated transport
  • endocytosis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51554

252837

Ensembl

ENSG00000129048

ENSMUSG00000079355

UniProt

Q9NPB9

Q924I3

RefSeq (mRNA)

NM_178445
NM_016557

NM_145700

RefSeq (protein)

NP_057641
NP_848540

NP_663746

Location (UCSC)Chr 3: 132.6 – 132.62 MbChr 9: 103.96 – 104 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

C-C chemokine receptor type 11 is a protein that in humans is encoded by the CCRL1 gene.[5][6]

The protein encoded by this gene is a member of the G protein-coupled receptor family, and is a receptor for C-C type chemokines. This receptor has been shown to bind dendritic cell- and T cell-activated chemokines including CCL19/ELC, CCL21/SLC, and CCL25/TECK. Alternatively spliced transcript variants encoding the same protein have been described.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000129048 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000079355 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Khoja H, Wang G, Ng CT, Tucker J, Brown T, Shyamala V (May 2000). "Cloning of CCRL1, an orphan seven transmembrane receptor related to chemokine receptors, expressed abundantly in the heart". Gene. 246 (1–2): 229–38. doi:10.1016/S0378-1119(00)00076-7. PMID 10767544.
  6. ^ a b "Entrez Gene: CCRL1 chemokine (C-C motif) receptor-like 1".

Further reading

  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Bacon KB, Schall TJ, Dairaghi DJ (1998). "RANTES activation of phospholipase D in Jurkat T cells: requirement of GTP-binding proteins ARF and RhoA". J. Immunol. 160 (4): 1894–900. doi:10.4049/jimmunol.160.4.1894. PMID 9469451.
  • Gosling J, Dairaghi DJ, Wang Y, et al. (2000). "Cutting edge: identification of a novel chemokine receptor that binds dendritic cell- and T cell-active chemokines including ELC, SLC, and TECK". J. Immunol. 164 (6): 2851–6. doi:10.4049/jimmunol.164.6.2851. PMID 10706668.
  • Schweickart VL, Epp A, Raport CJ, Gray PW (2000). "CCR11 is a functional receptor for the monocyte chemoattractant protein family of chemokines". J. Biol. Chem. 275 (13): 9550–6. doi:10.1074/jbc.275.13.9550. PMID 10734104.
  • Schweickart VL, Epp A, Raport CJ, Gray PW (2001). "CCR11 is a functional receptor for the monocyte chemoaattractant protein family of chemokines". The Journal of Biological Chemistry. 276 (1): 856. PMID 11134065.
  • Townson JR, Nibbs RJ (2002). "Characterization of mouse CCX-CKR, a receptor for the lymphocyte-attracting chemokines TECK/mCCL25, SLC/mCCL21 and MIP-3beta/mCCL19: comparison to human CCX-CKR". Eur. J. Immunol. 32 (5): 1230–41. doi:10.1002/1521-4141(200205)32:5<1230::AID-IMMU1230>3.0.CO;2-L. PMID 11981810. S2CID 21911348.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Comerford I, Milasta S, Morrow V, et al. (2006). "The chemokine receptor CCX-CKR mediates effective scavenging of CCL19 in vitro". Eur. J. Immunol. 36 (7): 1904–16. doi:10.1002/eji.200535716. PMID 16791897. S2CID 31855788.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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