CD40 (protein)

Mammalian protein found in humans
CD40
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1CZZ, 1D00, 1FLL, 1LB6, 3QD6, 5DMJ, 5IHL, 5DMI

Identifiers
AliasesCD40, Bp50, CDW40, TNFRSF5, p50, CD40 (protein), CD40 molecule
External IDsOMIM: 109535 MGI: 88336 HomoloGene: 954 GeneCards: CD40
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for CD40
Genomic location for CD40
Band20q13.12Start46,118,271 bp[1]
End46,129,863 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for CD40
Genomic location for CD40
Band2 H3|2 85.38 cMStart164,897,547 bp[2]
End164,914,868 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • lymph node

  • right lung

  • spleen

  • upper lobe of left lung

  • appendix

  • gastric mucosa

  • ascending aorta

  • right coronary artery

  • left coronary artery

  • pancreatic ductal cell
Top expressed in
  • spleen

  • blood

  • external carotid artery

  • internal carotid artery

  • semi-lunar valve

  • thymus

  • ascending aorta

  • vas deferens

  • aortic valve

  • subcutaneous adipose tissue
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • antigen binding
  • signal transducer activity
  • protein binding
  • tumor necrosis factor-activated receptor activity
  • enzyme binding
  • ubiquitin protein ligase binding
  • protein domain specific binding
  • signaling receptor activity
Cellular component
  • cytoplasm
  • integral component of membrane
  • intracellular membrane-bounded organelle
  • membrane
  • plasma membrane
  • integral component of plasma membrane
  • extracellular region
  • cell surface
  • CD40 receptor complex
  • extracellular exosome
  • external side of plasma membrane
  • extracellular space
  • neuronal cell body
  • varicosity
Biological process
  • positive regulation of protein phosphorylation
  • positive regulation of MAP kinase activity
  • positive regulation of interleukin-12 production
  • protein kinase B signaling
  • positive regulation of protein kinase C signaling
  • immune system process
  • cellular calcium ion homeostasis
  • tumor necrosis factor-mediated signaling pathway
  • immune response-regulating cell surface receptor signaling pathway
  • platelet activation
  • multicellular organism development
  • B cell activation
  • positive regulation of GTPase activity
  • response to lipopolysaccharide
  • B cell proliferation
  • cellular response to mechanical stimulus
  • positive regulation of endothelial cell apoptotic process
  • regulation of cell population proliferation
  • positive regulation of B cell proliferation
  • positive regulation of NF-kappaB transcription factor activity
  • defense response to virus
  • immune response
  • regulation of immune response
  • positive regulation of I-kappaB kinase/NF-kappaB signaling
  • apoptotic signaling pathway
  • positive regulation of isotype switching to IgG isotypes
  • cellular response to lipopolysaccharide
  • positive regulation of transcription by RNA polymerase II
  • defense response to protozoan
  • response to bacterium
  • response to nutrient levels
  • response to cobalamin
  • response to interferon-gamma
  • cellular response to erythropoietin
  • cellular response to interleukin-1
  • cellular response to tumor necrosis factor
  • response to peptide
  • inflammatory response
  • positive regulation of tyrosine phosphorylation of STAT protein
  • positive regulation of blood vessel endothelial cell migration
  • positive regulation of angiogenesis
  • protein-containing complex assembly
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

958

21939

Ensembl

ENSG00000101017

ENSMUSG00000017652

UniProt

P25942

P27512

RefSeq (mRNA)
NM_001250
NM_001302753
NM_152854
NM_001322421
NM_001322422

NM_001362758

NM_011611
NM_170702
NM_170703
NM_170704

RefSeq (protein)
NP_001241
NP_001289682
NP_001309350
NP_001309351
NP_690593

NP_001349687

NP_035741
NP_733803
NP_733804
NP_733805

Location (UCSC)Chr 20: 46.12 – 46.13 MbChr 2: 164.9 – 164.91 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cluster of differentiation 40, CD40 is a type I transmembrane protein found on antigen-presenting cells and is required for their activation. The binding of CD154 (CD40L) on TH cells to CD40 activates antigen presenting cells and induces a variety of downstream effects.

In addition it is expressed by various non- hematopoietic cells; activated CD4+ T cells primarily exhibit its ligand CD154, antigen-presenting cells including dendritic cells (DCs), B cells, macrophages, classical and non-classical monocytes, on a variety of non-immune cells including platelets and endothelial cells, and on several types of tumor cells.[5]

Mutations affecting this gene are the cause of autosomal recessive hyper-IgM immunodeficiency.

Discovery

Between the late 1950s and the mid-1980s, several immunology laboratories started to use the new hybridoma technology to develop monoclonal antibodies (mAbs) and define receptors expressed at different stages of hematopoietic cell differentiation. The goal of these experiments was to identify differentiation antigens that could be used to describe the stages of lymphocyte differentiation and various functional cell subsets. While doing these experiments, several mAbs were developed against a protein called CD40, a surface receptor of B cells that can be polyclonally activated by a binding ligand. Over time, many features and purposes of the CD40 signaling pathway were discovered, including the discovery of CD40 ligand (CD154), a T cell surface molecule which is capable of induction of contact dependent differentiation of B cells.[6]

Function

The protein receptor encoded by this gene is a member of the TNF-receptor superfamily. This receptor has been found to be essential in mediating a broad variety of immune and inflammatory responses including T cell-dependent immunoglobulin class switching, memory B cell development, and germinal center formation.[7] AT-hook transcription factor AKNA is reported to coordinately regulate the expression of this receptor and its ligand, which may be important for homotypic cell interactions. The interaction of this receptor and its ligand is found to be necessary for amyloid-beta-induced microglial activation, and thus is thought to be an early event in Alzheimer disease pathogenesis. Two alternatively spliced transcript variants of this gene encoding distinct isoforms have been reported.[8]

Specific effects on cells

In the macrophage, the primary signal for activation is IFN-γ from Th1 type CD4 T cells. The secondary signal is CD40L (CD154) on the Th1 cell which binds CD40 on the macrophage cell surface. As a result, the macrophage expresses more CD40 and TNF receptors on its surface which helps increase the level of activation. The increase in activation results in the induction of potent microbicidal substances in the macrophage, including reactive oxygen species and nitric oxide, leading to the destruction of ingested microbe.

The B cell can present antigens to helper T cells. If an activated T cell recognizes the peptide presented by the B cell, the CD40L on the T cell binds to the B cell's CD40 receptor, causing B cell activation. The T cell also produces IL-2, which directly influences B cells. As a result of this net stimulation, the B cell can undergo division, antibody isotype switching, and differentiation to plasma cells. The end-result is a B cell that is able to mass-produce specific antibodies against an antigenic target. Early evidence for these effects were that in CD40 or CD154 deficient mice, there is little class switching or germinal centre formation,[9] and immune responses are severely inhibited.

The expression of CD40 is diverse. CD40 is constitutively expressed by antigen presenting cells, including dendritic cells, B cells and macrophages. It can also be expressed by endothelial cells, smooth muscle cells, fibroblasts and epithelial cells.[10] Consistent with its widespread expression on normal cells, CD40 is also expressed on a wide range of tumor cells, including non-Hodgkin's and Hodgkin's lymphomas, myeloma and some carcinomas including nasopharynx, bladder, cervix, kidney and ovary. CD40 is also expressed on B cell precursors in the bone marrow, and there is some evidence that CD40-CD154 interactions may play a role in the control of B cell haematopoiesis.[11]

Interactions

CD40 (protein) has been shown to interact with TRAF2,[12][13][14] TRAF3,[13][15][16][17] TRAF6,[13][17] TRAF5[13][18] and TTRAP.[19] The remaining member of TRAF4 family, namely TRAF4, positively regulates CD40 signalling, but interacts with CD40 indirectly.[20]

CD40 also interacts with CD40L, due to the role of CD40 in stimulating immune synapses when this interaction happens with CD40L activates dendritic cells to activate antigen specific T cells. This occurs through the upregulation of major histocompatibility complex molecules increased expression of the co-stimulatory molecules CD86/CD80, and upregulation of TNF superfamily ligands on the dendritic cells surface, along with secretion of interleukin-12 (IL-12), which promotes CD8+ T cell activation. Moreover CD40/CD40L interactions provoke antitumor immune responses by increasing tumor cell immunogenic cell death (ICD), APC activation, tumor immunogenicity through upregulation of major histocompatibility complex (MHC) molecules, proinflammatory factor production, co-stimulation of CD4+ and CD8+ T cells, and tumor cell susceptibility to T-cell lysis. In addition the CD40/CD40LG axis is important for immune cell turnover and homeostasis under normal conditions. This is hypothesized because the closest association of cell proliferation is with CD40LG and the pro-apoptotic marker BAX also this axis plays a crucial role in promoting B cell activation and proliferation, the B-T cell immune synapses among with antigen presentation[21][5]

CD40 as a drug target in cancer

The CD40 molecule is a potential target for cancer immunotherapy. Anti-CD40 monoclonal antibodies may help prevent the killing of cancer cells by effector cells. Similarly, ligation of CD40 may lead to cell death in some tumor cells, as it is expressed in all lymphoid malignancies and in a number of carcinomas.[6] There are a number of completed and ongoing clinical trials using agonistic anti-CD40 monoclonal antibodies to elicit an anti-tumor T-cell response via dendritic cell activation. Over the past 20 years, numerous human CD40 monoclonal antibodies have been developed and evaluated in clinical trials due to encouraging variability in cancer animal models. Agonistic anti CD -40-Abs are designed to mimic CD40L by cross-linking CD40 and in this way promoting the maturation of DCs and enhancing their antigen presentation ability. This leads to an increase in tumor antigen-specific cytotoxic T cells, which may result in tumor eradication. On the other hand, the preclinical efficacy has not yet been tested in the clinical setting, and none of these monoclonal antibodies have progressed beyond early testing phases. Because of toxicity, the use of CD40 monoclonal antibodies has been limited to suboptimal doses, resulting in inadequate immune activation and antitumor activity.[5] More recently, agonistic CD40 therapy has been shown to decrease T cell cytotoxicity in preclinical glioma models, and in fact affect the efficacy of immune checkpoint blockade. This is likely due to the high mutational burden most of these models display, which causes them to respond better to immune checkpoint blockade than human glioma, but is nonetheless relevant information for research in immunomodulatory therapies.[22]

Hyper Ig-M immunodeficiency and CD40

Hyper-IgM syndrome is a primary immunodeficiency disorder characterized by increased serum levels of immunoglobulin (Ig) M and decreased levels of IgG, IgA, and IgE. CD40 is involved in the development of hyper-IgM syndrome in that it serves as a co-stimulatory molecule in the activation differentiation of B cells, which play a key role in producing immunoglobulins. In hyper-IgM syndrome, mutations in genes involved in CD40 signaling result in impaired B cell activation and differentiation, leading to increased production of IgM and decreased production of other immunoglobulins. As a result, individuals with hyper-IgM syndrome are susceptible to a wide range of infections and have an increased risk of autoimmune diseases and cancer. Currently, treatment for hyper-IgM syndrome involves the replacement of missing immunoglobulins, as well as other therapies to boost the immune system and prevent infections. Research is ongoing to better understand the role of CD40 in hyper-IgM syndrome and to develop new treatments for this disorder.[citation needed][23]

CD40 and drug development

CD40 is a promising target for the development of drugs to treat a variety of diseases, including cancer, autoimmune diseases, and chronic inflammation. By targeting CD40, it is possible to modulate the immune response and enhance the ability of the body to fight against diseases. For example, drugs that block CD40 signaling have shown promise in treating autoimmune diseases, such as rheumatoid arthritis, by suppressing the overactive immune response. On the other hand, drugs that activate CD40 signaling have shown efficacy in treating cancer by boosting the immune response against tumor cells. CD40 also plays a role in the development of chronic inflammation, and targeting CD40 with drugs has the potential to treat diseases such as Crohn's disease and ulcerative colitis. Overall, CD40 represents a promising target for the development of drugs to treat a wide range of diseases.[24][25]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000101017 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000017652 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b c Salomon R, Dahan R (2022). "Next Generation CD40 Agonistic Antibodies for Cancer Immunotherapy". Frontiers in Immunology. 13: 940674. doi:10.3389/fimmu.2022.940674. PMC 9326085. PMID 35911742.
  6. ^ a b Clark EA (2014). "A Short History of the B-Cell-Associated Surface Molecule CD40". Frontiers in Immunology. 5: 472. doi:10.3389/fimmu.2014.00472. PMC 4179537. PMID 25324844.
  7. ^ Grewal IS, Flavell RA (1998). "CD40 and CD154 in cell-mediated immunity". Annual Review of Immunology. 16: 111–135. doi:10.1146/annurev.immunol.16.1.111. PMID 9597126.
  8. ^ "Entrez Gene: CD40 CD40 molecule, TNF receptor superfamily member 5".
  9. ^ Kawabe T, Naka T, Yoshida K, Tanaka T, Fujiwara H, Suematsu S, et al. (June 1994). "The immune responses in CD40-deficient mice: impaired immunoglobulin class switching and germinal center formation". Immunity. 1 (3): 167–178. doi:10.1016/1074-7613(94)90095-7. PMID 7534202.
  10. ^ Chatzigeorgiou A, Lyberi M, Chatzilymperis G, Nezos A, Kamper E (2009). "CD40/CD40L signaling and its implication in health and disease". BioFactors. 35 (6): 474–483. doi:10.1002/biof.62. PMID 19904719. S2CID 22911861.
  11. ^ Carlring J, Altaher HM, Clark S, Chen X, Latimer SL, Jenner T, et al. (May 2011). "CD154-CD40 interactions in the control of murine B cell hematopoiesis". Journal of Leukocyte Biology. 89 (5): 697–706. doi:10.1189/jlb.0310179. PMC 3382295. PMID 21330346.
  12. ^ McWhirter SM, Pullen SS, Holton JM, Crute JJ, Kehry MR, Alber T (July 1999). "Crystallographic analysis of CD40 recognition and signaling by human TRAF2". Proceedings of the National Academy of Sciences of the United States of America. 96 (15): 8408–8413. Bibcode:1999PNAS...96.8408M. doi:10.1073/pnas.96.15.8408. PMC 17529. PMID 10411888.
  13. ^ a b c d Tsukamoto N, Kobayashi N, Azuma S, Yamamoto T, Inoue J (February 1999). "Two differently regulated nuclear factor kappaB activation pathways triggered by the cytoplasmic tail of CD40". Proceedings of the National Academy of Sciences of the United States of America. 96 (4): 1234–1239. Bibcode:1999PNAS...96.1234T. doi:10.1073/pnas.96.4.1234. PMC 15446. PMID 9990007.
  14. ^ Malinin NL, Boldin MP, Kovalenko AV, Wallach D (February 1997). "MAP3K-related kinase involved in NF-kappaB induction by TNF, CD95 and IL-1". Nature. 385 (6616): 540–544. doi:10.1038/385540a0. PMID 9020361. S2CID 4366355.
  15. ^ Hu HM, O'Rourke K, Boguski MS, Dixit VM (December 1994). "A novel RING finger protein interacts with the cytoplasmic domain of CD40". The Journal of Biological Chemistry. 269 (48): 30069–30072. doi:10.1016/S0021-9258(18)43772-6. PMID 7527023.
  16. ^ Ni CZ, Welsh K, Leo E, Chiou CK, Wu H, Reed JC, Ely KR (September 2000). "Molecular basis for CD40 signaling mediated by TRAF3". Proceedings of the National Academy of Sciences of the United States of America. 97 (19): 10395–10399. Bibcode:2000PNAS...9710395N. doi:10.1073/pnas.97.19.10395. PMC 27035. PMID 10984535.
  17. ^ a b Roy N, Deveraux QL, Takahashi R, Salvesen GS, Reed JC (December 1997). "The c-IAP-1 and c-IAP-2 proteins are direct inhibitors of specific caspases". The EMBO Journal. 16 (23): 6914–6925. doi:10.1093/emboj/16.23.6914. PMC 1170295. PMID 9384571.
  18. ^ Ishida TK, Tojo T, Aoki T, Kobayashi N, Ohishi T, Watanabe T, et al. (September 1996). "TRAF5, a novel tumor necrosis factor receptor-associated factor family protein, mediates CD40 signaling". Proceedings of the National Academy of Sciences of the United States of America. 93 (18): 9437–9442. Bibcode:1996PNAS...93.9437I. doi:10.1073/pnas.93.18.9437. PMC 38446. PMID 8790348.
  19. ^ Pype S, Declercq W, Ibrahimi A, Michiels C, Van Rietschoten JG, Dewulf N, et al. (June 2000). "TTRAP, a novel protein that associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor-associated factors (TRAFs), and that inhibits nuclear factor-kappa B activation". The Journal of Biological Chemistry. 275 (24): 18586–18593. doi:10.1074/jbc.M000531200. PMID 10764746.
  20. ^ Sharma S, Pavlasova GM, Seda V, Cerna KA, Vojackova E, Filip D, et al. (May 2021). "miR-29 modulates CD40 signaling in chronic lymphocytic leukemia by targeting TRAF4: an axis affected by BCR inhibitors". Blood. 137 (18): 2481–2494. doi:10.1182/blood.2020005627. PMC 7610744. PMID 33171493.
  21. ^ Yan C, Richmond A (November 2021). "Hiding in the dark: pan-cancer characterization of expression and clinical relevance of CD40 to immune checkpoint blockade therapy". Molecular Cancer. 20 (1): 146. doi:10.1186/s12943-021-01442-3. PMC 8582157. PMID 34758832.
  22. ^ van Hooren, Luuk; Vaccaro, Alessandra; Ramachandran, Mohanraj; Vazaios, Konstantinos; Libard, Sylwia; van de Walle, Tiarne; Georganaki, Maria; Huang, Hua; Pietilä, Ilkka; Lau, Joey; Ulvmar, Maria H.; Karlsson, Mikael C. I.; Zetterling, Maria; Mangsbo, Sara M.; Jakola, Asgeir S. (2021-07-05). "Agonistic CD40 therapy induces tertiary lymphoid structures but impairs responses to checkpoint blockade in glioma". Nature Communications. 12 (1): 4127. Bibcode:2021NatCo..12.4127V. doi:10.1038/s41467-021-24347-7. ISSN 2041-1723. PMC 8257767. PMID 34226552.
  23. ^ Yazdani, R., Fekrvand, S., Shahkarami, S., Azizi, G., Moazzami, B., Abolhassani, H., & Aghamohammadi, A. (2019). The hyper IgM syndromes: Epidemiology, pathogenesis, clinical manifestations, diagnosis and management. Clinical immunology (Orlando, Fla.), 198, 19–30. https://doi.org/10.1016/j.clim.2018.11.007
  24. ^ Singh, Takshveer; Fatehi Hassanabad, Mortaza; Fatehi Hassanabad, Ali (December 2021). "Non-small cell lung cancer: Emerging molecular targeted and immunotherapeutic agents". Biochimica et Biophysica Acta (BBA) - Reviews on Cancer. 1876 (2): 188636. doi:10.1016/j.bbcan.2021.188636. ISSN 0304-419X. PMID 34655692. S2CID 239010744.
  25. ^ Salomon, Ran; Dahan, Rony (2022-07-13). "Next Generation CD40 Agonistic Antibodies for Cancer Immunotherapy". Frontiers in Immunology. 13. doi:10.3389/fimmu.2022.940674. ISSN 1664-3224. PMC 9326085. PMID 35911742.

External links

  • Human CD40 genome location and CD40 gene details page in the UCSC Genome Browser.
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human Tumor necrosis factor receptor superfamily member 5 (CD40)

Further reading

  • Parham P (2004). The Immune System (2nd ed.). Garland Science. pp. 169–173. ISBN 978-0-8153-4093-5.
  • Wang JH, Zhang YW, Zhang P, Deng BQ, Ding S, Wang ZK, et al. (September 2013). "CD40 ligand as a potential biomarker for atherosclerotic instability". Neurological Research. 35 (7): 693–700. doi:10.1179/1743132813Y.0000000190. PMC 3770830. PMID 23561892.
  • Banchereau J, Bazan F, Blanchard D, Brière F, Galizzi JP, van Kooten C, et al. (1994). "The CD40 antigen and its ligand". Annual Review of Immunology. 12: 881–922. doi:10.1146/annurev.iy.12.040194.004313. PMID 7516669.
  • van Kooten C, Banchereau J (January 2000). "CD40-CD40 ligand". Journal of Leukocyte Biology. 67 (1): 2–17. doi:10.1002/jlb.67.1.2. PMID 10647992. S2CID 35592719.
  • Schattner EJ (May 2000). "CD40 ligand in CLL pathogenesis and therapy". Leukemia & Lymphoma. 37 (5–6): 461–472. doi:10.3109/10428190009058499. PMID 11042507. S2CID 39398949.
  • Bhushan A, Covey LR (2002). "CD40:CD40L interactions in X-linked and non-X-linked hyper-IgM syndromes". Immunologic Research. 24 (3): 311–324. doi:10.1385/IR:24:3:311. PMID 11817328. S2CID 19537892.
  • Cheng G, Schoenberger SP (2002). "CD40 signaling and autoimmunity". Signal Transduction Pathways in Autoimmunity. Current Directions in Autoimmunity. Vol. 5. pp. 51–61. doi:10.1159/000060547. ISBN 978-3-8055-7308-5. PMID 11826760.
  • Dallman C, Johnson PW, Packham G (January 2003). "Differential regulation of cell survival by CD40". Apoptosis. 8 (1): 45–53. doi:10.1023/A:1021696902187. PMID 12510151. S2CID 22461134.
  • O'Sullivan B, Thomas R (July 2003). "Recent advances on the role of CD40 and dendritic cells in immunity and tolerance". Current Opinion in Hematology. 10 (4): 272–278. doi:10.1097/00062752-200307000-00004. PMID 12799532. S2CID 43043879.
  • Benveniste EN, Nguyen VT, Wesemann DR (January 2004). "Molecular regulation of CD40 gene expression in macrophages and microglia". Brain, Behavior, and Immunity. 18 (1): 7–12. doi:10.1016/j.bbi.2003.09.001. PMID 14651941. S2CID 8081107.
  • Xu Y, Song G (2005). "The role of CD40-CD154 interaction in cell immunoregulation". Journal of Biomedical Science. 11 (4): 426–438. doi:10.1159/000077892. PMID 15153777. S2CID 202658036.
  • Contin C, Couzi L, Moreau JF, Déchanet-Merville J, Merville P (2004). "[Immune dysfuntion of uremic patients: potential role for the soluble form of CD40]". Nephrologie. 25 (4): 119–126. PMID 15291139.
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