CELSR3

Protein-coding gene in the species Homo sapiens
CELSR3
Identifiers
AliasesCELSR3, CDHF11, EGFL1, FMI1, HFMI1, MEGF2, RESDA1, ADGRC3, cadherin EGF LAG seven-pass G-type receptor 3
External IDsOMIM: 604264 MGI: 1858236 HomoloGene: 1077 GeneCards: CELSR3
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for CELSR3
Genomic location for CELSR3
Band3p21.31Start48,636,463 bp[1]
End48,662,886 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for CELSR3
Genomic location for CELSR3
Band9|9 F2Start108,703,519 bp[2]
End108,730,168 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • pituitary gland

  • Brodmann area 10

  • cerebellar vermis

  • anterior pituitary

  • postcentral gyrus

  • Region I of hippocampus proper

  • entorhinal cortex

  • superior frontal gyrus

  • Brodmann area 9
Top expressed in
  • cerebellar cortex

  • hypothalamus

  • olfactory bulb

  • ganglionic eminence

  • superior frontal gyrus

  • peripheral nervous system

  • ganglion

  • islet of Langerhans

  • hippocampus proper

  • autonomic nervous system
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • calcium ion binding
  • G protein-coupled receptor activity
  • signal transducer activity
  • protein binding
  • transmembrane signaling receptor activity
Cellular component
  • integral component of membrane
  • membrane
  • plasma membrane
Biological process
  • regulation of protein phosphorylation
  • dopaminergic neuron axon guidance
  • G protein-coupled receptor signaling pathway
  • serotonergic neuron axon guidance
  • neuron migration
  • regulation of protein localization
  • multicellular organism development
  • Wnt signaling pathway, planar cell polarity pathway
  • cell surface receptor signaling pathway
  • cell adhesion
  • axonal fasciculation
  • signal transduction
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • planar cell polarity pathway involved in axon guidance
  • cilium assembly
  • cell-cell adhesion
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1951

107934

Ensembl

ENSG00000008300

ENSMUSG00000023473

UniProt

Q9NYQ7

Q91ZI0

RefSeq (mRNA)

NM_001407

NM_080437
NM_001359572
NM_001359573

RefSeq (protein)

NP_001398

NP_536685
NP_001346501
NP_001346502

Location (UCSC)Chr 3: 48.64 – 48.66 MbChr 9: 108.7 – 108.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cadherin EGF LAG seven-pass G-type receptor 3 is a protein that in humans is encoded by the CELSR3 gene.[5][6]

The protein encoded by this gene is a member of the flamingo subfamily, part of the cadherin superfamily. The flamingo subfamily consists of nonclassic-type cadherins; a subpopulation that does not interact with catenins. The flamingo cadherins are located at the plasma membrane and have nine cadherin domains, seven epidermal growth factor-like repeats and two laminin A G-type repeats in their ectodomain. They also have seven transmembrane domains, a characteristic unique to this subfamily. It is postulated that these proteins are receptors involved in contact-mediated communication, with cadherin domains acting as homophilic binding regions and the EGF-like domains involved in cell adhesion and receptor-ligand interactions. The specific function of this particular member has not been determined.[6]

See also

  • Flamingo (protein)

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000008300 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000023473 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Nakayama M, Nakajima D, Nagase T, Nomura N, Seki N, Ohara O (Sep 1998). "Identification of high-molecular-weight proteins with multiple EGF-like motifs by motif-trap screening". Genomics. 51 (1): 27–34. doi:10.1006/geno.1998.5341. PMID 9693030.
  6. ^ a b "Entrez Gene: CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)".

Further reading

  • Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Wu Q, Maniatis T (1999). "A striking organization of a large family of human neural cadherin-like cell adhesion genes". Cell. 97 (6): 779–90. doi:10.1016/S0092-8674(00)80789-8. PMID 10380929. S2CID 6014717.
  • Wu Q, Maniatis T (2000). "Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes". Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3124–9. doi:10.1073/pnas.060027397. PMC 16203. PMID 10716726.
  • Formstone CJ, Barclay J, Rees M, Little PF (2000). "Chromosomal localization of Celsr2 and Celsr3 in the mouse; Celsr3 is a candidate for the tippy (tip) lethal mutant on chromosome 9". Mamm. Genome. 11 (5): 392–4. doi:10.1007/s003350010073. PMID 10790539. S2CID 21333332.
  • Nakayama M, Kikuno R, Ohara O (2003). "Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs". Genome Res. 12 (11): 1773–84. doi:10.1101/gr.406902. PMC 187542. PMID 12421765.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Bjarnadóttir TK, Fredriksson R, Höglund PJ, et al. (2005). "The human and mouse repertoire of the adhesion family of G-protein-coupled receptors". Genomics. 84 (1): 23–33. doi:10.1016/j.ygeno.2003.12.004. PMID 15203201.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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