FGF12

Protein-coding gene in the species Homo sapiens
FGF12
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1Q1U, 4JQ0

Identifiers
AliasesFGF12, FGF12B, FHF1, fibroblast growth factor 12, EIEE47, DEE47
External IDsOMIM: 601513 MGI: 109183 HomoloGene: 10874 GeneCards: FGF12
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for FGF12
Genomic location for FGF12
Band3q28-q29Start192,139,390 bp[1]
End192,767,764 bp[1]
Gene location (Mouse)
Chromosome 16 (mouse)
Chr.Chromosome 16 (mouse)[2]
Chromosome 16 (mouse)
Genomic location for FGF12
Genomic location for FGF12
Band16 B2|16 19.38 cMStart27,978,850 bp[2]
End28,571,820 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • pons

  • right ventricle

  • middle temporal gyrus

  • prefrontal cortex

  • superior frontal gyrus

  • dorsolateral prefrontal cortex

  • vena cava

  • postcentral gyrus

  • Brodmann area 23

  • Brodmann area 46
Top expressed in
  • superior frontal gyrus

  • medial dorsal nucleus

  • facial motor nucleus

  • medial geniculate nucleus

  • pontine nuclei

  • anterior horn of spinal cord

  • lateral geniculate nucleus

  • medial vestibular nucleus

  • cerebellar cortex

  • substantia nigra
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • sodium channel regulator activity
  • heparin binding
  • transmembrane transporter binding
  • fibroblast growth factor receptor binding
  • protein binding
  • growth factor activity
Cellular component
  • nucleus
  • intracellular anatomical structure
  • extracellular space
Biological process
  • negative regulation of cation channel activity
  • adult locomotory behavior
  • cell-cell signaling
  • cardiac muscle cell action potential involved in contraction
  • regulation of membrane depolarization
  • nervous system development
  • fibroblast growth factor receptor signaling pathway
  • JNK cascade
  • heart development
  • neuromuscular process
  • regulation of sodium ion transmembrane transporter activity
  • positive regulation of sodium ion transport
  • regulation of sodium ion transmembrane transport
  • signal transduction
  • chemical synaptic transmission
  • regulation of voltage-gated sodium channel activity
  • regulation of neuronal action potential
  • regulation of signaling receptor activity
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2257

14167

Ensembl

ENSG00000114279

ENSMUSG00000022523

UniProt

P61328

P61329

RefSeq (mRNA)

NM_004113
NM_021032
NM_001377292
NM_001377293
NM_001377294

NM_001276419
NM_001276420
NM_010199
NM_183064
NM_001357064

RefSeq (protein)

NP_004104
NP_066360
NP_001364221
NP_001364222
NP_001364223

NP_001263348
NP_001263349
NP_034329
NP_898887
NP_001343993

Location (UCSC)Chr 3: 192.14 – 192.77 MbChr 16: 27.98 – 28.57 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Fibroblast growth factor 12 is a protein that in humans is encoded by the FGF12 gene.[5][6][7]

The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members possess broad mitogenic and cell survival activities, and are involved in a variety of biological processes, including embryonic development, cell growth, morphogenesis, tissue repair, tumor growth, and invasion. This growth factor lacks the N-terminal signal sequence present in most of the FGF family members, but it contains clusters of basic residues that have been demonstrated to act as a nuclear localization signal. When transfected into mammalian cells, this protein accumulated in the nucleus, but was not secreted. The specific function of this gene has not yet been determined. Two alternatively spliced transcript variants encoding distinct isoforms have been reported.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000114279 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000022523 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Smallwood PM, Munoz-Sanjuan I, Tong P, Macke JP, Hendry SH, Gilbert DJ, Copeland NG, Jenkins NA, Nathans J (Oct 1996). "Fibroblast growth factor (FGF) homologous factors: new members of the FGF family implicated in nervous system development". Proc Natl Acad Sci U S A. 93 (18): 9850–7. Bibcode:1996PNAS...93.9850S. doi:10.1073/pnas.93.18.9850. PMC 38518. PMID 8790420.
  6. ^ Liu Y, Chiu IM (Nov 1997). "Assignment of FGF12, the human FGF homologous factor 1 gene, to chromosome 3q29-->3qter by fluorescence in situ hybridization". Cytogenet Cell Genet. 78 (1): 48–9. doi:10.1159/000134625. PMID 9345906.
  7. ^ a b "Entrez Gene: FGF12 fibroblast growth factor 12".

Further reading

  • Robertson NG, Khetarpal U, Gutiérrez-Espeleta GA, et al. (1995). "Isolation of novel and known genes from a human fetal cochlear cDNA library using subtractive hybridization and differential screening". Genomics. 23 (1): 42–50. doi:10.1006/geno.1994.1457. PMID 7829101.
  • Kok LD, Tsui SK, Waye M, et al. (1999). "Cloning and characterization of a cDNA encoding a novel fibroblast growth factor preferentially expressed in human heart". Biochem. Biophys. Res. Commun. 255 (3): 717–21. doi:10.1006/bbrc.1999.0178. PMID 10049777.
  • Schoorlemmer J, Goldfarb M (2001). "Fibroblast growth factor homologous factors are intracellular signaling proteins". Curr. Biol. 11 (10): 793–7. Bibcode:2001CBio...11..793S. doi:10.1016/S0960-9822(01)00232-9. PMC 3216481. PMID 11378392.
  • Liu CJ, Dib-Hajj SD, Renganathan M, et al. (2003). "Modulation of the cardiac sodium channel Nav1.5 by fibroblast growth factor homologous factor 1B". J. Biol. Chem. 278 (2): 1029–36. doi:10.1074/jbc.M207074200. PMID 12401812.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Olsen SK, Garbi M, Zampieri N, et al. (2003). "Fibroblast growth factor (FGF) homologous factors share structural but not functional homology with FGFs". J. Biol. Chem. 278 (36): 34226–36. doi:10.1074/jbc.M303183200. PMID 12815063.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Popovici C, Conchonaud F, Birnbaum D, Roubin R (2004). "Functional phylogeny relates LET-756 to fibroblast growth factor 9". J. Biol. Chem. 279 (38): 40146–52. doi:10.1074/jbc.M405795200. PMID 15199049.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • v
  • t
  • e
  • 1q1u: Crystal structure of human FHF1b (FGF12b)
    1q1u: Crystal structure of human FHF1b (FGF12b)
  • v
  • t
  • e
Angiopoietin
  • Kinase inhibitors: Altiratinib
  • CE-245677
  • Rebastinib
CNTF
EGF (ErbB)
EGF
(ErbB1/HER1)
ErbB2/HER2
  • Agonists: Unknown/none
ErbB3/HER3
ErbB4/HER4
FGF
FGFR1
FGFR2
  • Antibodies: Aprutumab
  • Aprutumab ixadotin
FGFR3
FGFR4
Unsorted
HGF (c-Met)
IGF
IGF-1
  • Kinase inhibitors: BMS-754807
  • Linsitinib
  • NVP-ADW742
  • NVP-AEW541
  • OSl-906
IGF-2
  • Antibodies: Dusigitumab
  • Xentuzumab (against IGF-1 and IGF-2)
Others
  • Cleavage products/derivatives with unknown target: Glypromate (GPE, (1-3)IGF-1)
  • Trofinetide
LNGF (p75NTR)
  • Aptamers: Against NGF: RBM-004
  • Decoy receptors: LEVI-04 (p75NTR-Fc)
PDGF
RET (GFL)
GFRα1
GFRα2
GFRα3
GFRα4
Unsorted
  • Kinase inhibitors: Agerafenib
SCF (c-Kit)
TGFβ
  • See here instead.
Trk
TrkA
  • Negative allosteric modulators: VM-902A
  • Aptamers: Against NGF: RBM-004
  • Decoy receptors: ReN-1820 (TrkAd5)
TrkB
TrkC
VEGF
Others


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