FOXF2

Protein-coding gene in the species Homo sapiens
FOXF2
Identifiers
AliasesFOXF2, FKHL6, FREAC-2, FREAC2, forkhead box F2
External IDsOMIM: 603250 MGI: 1347479 HomoloGene: 1115 GeneCards: FOXF2
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for FOXF2
Genomic location for FOXF2
Band6p25.3Start1,389,576 bp[1]
End1,395,603 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for FOXF2
Genomic location for FOXF2
Band13|13 A3.2Start31,809,799 bp[2]
End31,815,386 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • periodontal fiber

  • urethra

  • gastric mucosa

  • lower lobe of lung

  • pylorus

  • right lung

  • transverse colon

  • upper lobe of lung

  • upper lobe of left lung

  • fundus
Top expressed in
  • molar

  • left lung lobe

  • sclerotome

  • tongue

  • urethra

  • Hindgut

  • thumb

  • index finger

  • maxillary prominence

  • ring finger
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
  • DNA-binding transcription factor activity
  • DNA binding
  • transcription factor binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
  • protein binding
Cellular component
  • transcription regulator complex
  • nucleus
Biological process
  • transcription, DNA-templated
  • genitalia development
  • positive regulation of transcription, DNA-templated
  • roof of mouth development
  • regulation of transcription, DNA-templated
  • positive regulation of transcription by RNA polymerase II
  • epithelial to mesenchymal transition
  • transcription by RNA polymerase II
  • anatomical structure morphogenesis
  • cell differentiation
  • extracellular matrix organization
  • establishment of planar polarity of embryonic epithelium
  • negative regulation of transcription, DNA-templated
  • embryonic digestive tract development
  • embryonic camera-type eye morphogenesis
  • protein polyubiquitination
  • proteasome-mediated ubiquitin-dependent protein catabolic process
  • regulation of proteasomal ubiquitin-dependent protein catabolic process
  • regulation of protein polyubiquitination
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2295

14238

Ensembl

ENSG00000137273

ENSMUSG00000038402

UniProt

Q12947

O54743

RefSeq (mRNA)

NM_001452

NM_010225

RefSeq (protein)

NP_001443

NP_034355

Location (UCSC)Chr 6: 1.39 – 1.4 MbChr 13: 31.81 – 31.82 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Forkhead box protein F2 is a protein that in humans is encoded by the FOXF2 gene.[5][6]

Location

The FOXF2 gene is on the short arm of chromosome 6 at position 24.[5]

Function

The FOXF2 gene belongs to the forkhead family, also known as FOX proteins, which is a family of transcription factors characterized by a distinct forkhead domain. FOXF2 helps regulate several pulmonary genes, and is expressed in the lungs and placenta.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000137273 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038402 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b c "Entrez Gene: FOXF2 forkhead box F2".
  6. ^ Pierrou S, Hellqvist M, Samuelsson L, Enerbäck S, Carlsson P (Oct 1994). "Cloning and characterization of seven human forkhead proteins: binding site specificity and DNA bending". The EMBO Journal. 13 (20): 5002–12. doi:10.1002/j.1460-2075.1994.tb06827.x. PMC 395442. PMID 7957066.
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(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies