HBE1

HBE1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1A9W

Identifiers
AliasesHBE1, HBE, hemoglobin subunit epsilon 1
External IDsOMIM: 142100 MGI: 96024 HomoloGene: 110794 GeneCards: HBE1
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for HBE1
Genomic location for HBE1
Band11p15.4Start5,268,345 bp[1]
End5,505,652 bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for HBE1
Genomic location for HBE1
Band7 E3|7 54.85 cMStart103,490,844 bp[2]
End103,492,371 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • blood

  • monocyte

  • stromal cell of endometrium

  • gastrocnemius muscle

  • right adrenal gland

  • placenta

  • left ventricle

  • popliteal artery

  • right lung
Top expressed in
  • abdominal wall

  • yolk sac

  • somite

  • endocardial cushion

  • internal carotid artery

  • maxillary prominence

  • external carotid artery

  • hand

  • otic placode

  • placenta
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • hemoglobin alpha binding
  • metal ion binding
  • heme binding
  • iron ion binding
  • oxygen binding
  • oxygen carrier activity
  • protein binding
  • peroxidase activity
  • haptoglobin binding
  • organic acid binding
Cellular component
  • cytosol
  • blood microparticle
  • hemoglobin complex
  • haptoglobin-hemoglobin complex
Biological process
  • protein heterooligomerization
  • blood coagulation
  • oxygen transport
  • response to organic cyclic compound
  • transport
  • hydrogen peroxide catabolic process
  • cellular oxidant detoxification
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3046

15132

Ensembl

ENSG00000213931

ENSMUSG00000052217

UniProt

P02100

P04444

RefSeq (mRNA)

NM_005330

NM_008219

RefSeq (protein)

NP_005321
NP_005321.1

NP_032245

Location (UCSC)Chr 11: 5.27 – 5.51 MbChr 7: 103.49 – 103.49 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Hemoglobin subunit epsilon is a protein that in humans is encoded by the HBE1 gene.[5]

Function

The epsilon globin gene (HBE) is normally expressed in the embryonic yolk sac: two epsilon chains together with two zeta chains (an alpha-like globin) constitute the embryonic hemoglobin Hb Gower I; two epsilon chains together with two alpha chains form the embryonic Hb Gower II. Both of these embryonic hemoglobins are normally supplanted by fetal, and later, adult hemoglobin. The five beta-like globin genes are found within a 45 kb cluster on chromosome 11 in the following order: 5' - epsilon – gamma-G – gamma-A – delta – beta - 3'.[6]

See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000213931 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000052217 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Higgs DR, Vickers MA, Wilkie AO, Pretorius IM, Jarman AP, Weatherall DJ (May 1989). "A review of the molecular genetics of the human alpha-globin gene cluster". Blood. 73 (5): 1081–104. doi:10.1182/blood.V73.5.1081.1081. PMID 2649166.
  6. ^ "Entrez Gene: HBE1 hemoglobin, epsilon 1".

Further reading

  • Clegg JB (1982). "Embryonic hemoglobin: sequence of the epsilon and zeta chains". Tex. Rep. Biol. Med. 40: 23–8. PMID 6172865.
  • Giardina B, Messana I, Scatena R, Castagnola M (1995). "The multiple functions of hemoglobin". Crit. Rev. Biochem. Mol. Biol. 30 (3): 165–96. doi:10.3109/10409239509085142. PMID 7555018.
  • Chang JC, Kan YW (1979). "beta 0 thalassemia, a nonsense mutation in man". Proc. Natl. Acad. Sci. U.S.A. 76 (6): 2886–9. Bibcode:1979PNAS...76.2886C. doi:10.1073/pnas.76.6.2886. PMC 383714. PMID 88735.
  • Proudfoot NJ, Baralle FE (1980). "Molecular cloning of human epsilon-globin gene". Proc. Natl. Acad. Sci. U.S.A. 76 (11): 5435–9. doi:10.1073/pnas.76.11.5435. PMC 411663. PMID 160554.
  • Proudfoot NJ, Brownlee GG (1976). "3' non-coding region sequences in eukaryotic messenger RNA". Nature. 263 (5574): 211–4. Bibcode:1976Natur.263..211P. doi:10.1038/263211a0. PMID 822353. S2CID 4211839.
  • Marotta CA, Forget BG, Cohne-Solal M, et al. (1977). "Human beta-globin messenger RNA. I. Nucleotide sequences derived from complementary RNA". J. Biol. Chem. 252 (14): 5019–31. doi:10.1016/S0021-9258(17)40154-2. PMID 873928.
  • Gelinas R, Endlich B, Pfeiffer C, et al. (1985). "G to A substitution in the distal CCAAT box of the A gamma-globin gene in Greek hereditary persistence of fetal haemoglobin". Nature. 313 (6000): 323–5. Bibcode:1985Natur.313..323G. doi:10.1038/313323a0. PMID 2578619. S2CID 4353948.
  • Collins FS, Metherall JE, Yamakawa M, et al. (1985). "A point mutation in the A gamma-globin gene promoter in Greek hereditary persistence of fetal haemoglobin". Nature. 313 (6000): 325–6. Bibcode:1985Natur.313..325C. doi:10.1038/313325a0. PMID 2578620. S2CID 4315881.
  • Lang KM, Spritz RA (1985). "Cloning specific complete polyadenylylated 3'-terminal cDNA segments". Gene. 33 (2): 191–6. doi:10.1016/0378-1119(85)90093-9. PMID 2581851.
  • Ley TJ, Maloney KA, Gordon JI, Schwartz AL (1989). "Globin gene expression in erythroid human fetal liver cells". J. Clin. Invest. 83 (3): 1032–8. doi:10.1172/JCI113944. PMC 303780. PMID 2921315.
  • Chabot B, Black DL, LeMaster DM, Steitz JA (1986). "The 3' splice site of pre-messenger RNA is recognized by a small nuclear ribonucleoprotein". Science. 230 (4732): 1344–9. doi:10.1126/science.2933810. PMID 2933810.
  • Engelke DR, Hoener PA, Collins FS (1988). "Direct sequencing of enzymatically amplified human genomic DNA". Proc. Natl. Acad. Sci. U.S.A. 85 (2): 544–8. Bibcode:1988PNAS...85..544E. doi:10.1073/pnas.85.2.544. PMC 279587. PMID 3267215.
  • Fei YJ, Stoming TA, Efremov GD, et al. (1988). "Beta-thalassemia due to a T----A mutation within the ATA box". Biochem. Biophys. Res. Commun. 153 (2): 741–7. doi:10.1016/S0006-291X(88)81157-4. PMID 3382401.
  • Prchal JT, Cashman DP, Kan YW (1986). "Hemoglobin Long Island is caused by a single mutation (adenine to cytosine) resulting in a failure to cleave amino-terminal methionine". Proc. Natl. Acad. Sci. U.S.A. 83 (1): 24–7. Bibcode:1986PNAS...83...24P. doi:10.1073/pnas.83.1.24. PMC 322783. PMID 3455755.
  • van Santen VL, Spritz RA (1985). "mRNA precursor splicing in vivo: sequence requirements determined by deletion analysis of an intervening sequence". Proc. Natl. Acad. Sci. U.S.A. 82 (9): 2885–9. Bibcode:1985PNAS...82.2885V. doi:10.1073/pnas.82.9.2885. PMC 397671. PMID 3857622.
  • Ruskin B, Greene JM, Green MR (1985). "Cryptic branch point activation allows accurate in vitro splicing of human beta-globin intron mutants". Cell. 41 (3): 833–44. doi:10.1016/S0092-8674(85)80064-7. PMID 3879973. S2CID 41979452.
  • Tuan D, Solomon W, Li Q, London IM (1985). "The "beta-like-globin" gene domain in human erythroid cells". Proc. Natl. Acad. Sci. U.S.A. 82 (19): 6384–8. Bibcode:1985PNAS...82.6384T. doi:10.1073/pnas.82.19.6384. PMC 390720. PMID 3879975.
  • Orkin SH, Antonarakis SE, Kazazian HH (1984). "Base substitution at position -88 in a beta-thalassemic globin gene. Further evidence for the role of distal promoter element ACACCC". J. Biol. Chem. 259 (14): 8679–81. doi:10.1016/S0021-9258(17)47203-6. PMID 6086605.
  • v
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Proteins that contain heme (hemoproteins)
Globins
Hemoglobin
Subunits
Alpha locus on 16:
Beta locus on 11:
Tetramers
stages of
development:
Embryonic
Fetal
Adult
pathology:
Compounds
Other human
Nonhuman
Other
human:
plant:
Other
see also disorders of globin and globulin proteins
  • v
  • t
  • e
  • 1a9w: HUMAN EMBRYONIC GOWER II CARBONMONOXY HEMOGLOBIN
    1a9w: HUMAN EMBRYONIC GOWER II CARBONMONOXY HEMOGLOBIN

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