KCNF1

Protein-coding gene in the species Homo sapiens
KCNF1
Identifiers
AliasesKCNF1, IK8, KCNF, KV5.1, kH1, potassium voltage-gated channel modifier subfamily F member 1
External IDsOMIM: 603787 MGI: 2687399 HomoloGene: 124236 GeneCards: KCNF1
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for KCNF1
Genomic location for KCNF1
Band2p25.1Start10,911,934 bp[1]
End10,914,225 bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for KCNF1
Genomic location for KCNF1
Band12|12 A1.1Start17,222,101 bp[2]
End17,226,889 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • prefrontal cortex

  • putamen

  • nucleus accumbens

  • caudate nucleus

  • cingulate gyrus

  • dorsolateral prefrontal cortex

  • Brodmann area 9

  • orbitofrontal cortex

  • Brodmann area 10

  • superior frontal gyrus
Top expressed in
  • temporal lobe

  • prefrontal cortex

  • amygdala

  • piriform cortex

  • olfactory bulb

  • superior frontal gyrus

  • supraoptic nucleus

  • nucleus accumbens

  • primary motor cortex

  • cingulate gyrus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • ion channel activity
  • potassium channel activity
  • voltage-gated ion channel activity
  • voltage-gated potassium channel activity
Cellular component
  • integral component of membrane
  • voltage-gated potassium channel complex
  • plasma membrane
  • membrane
Biological process
  • potassium ion transport
  • regulation of ion transmembrane transport
  • protein homooligomerization
  • ion transport
  • transmembrane transport
  • potassium ion transmembrane transport
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3754

382571

Ensembl

ENSG00000162975

ENSMUSG00000051726

UniProt

Q9H3M0

Q7TSH7

RefSeq (mRNA)

NM_002236

NM_201531

RefSeq (protein)

NP_002227

NP_963289

Location (UCSC)Chr 2: 10.91 – 10.91 MbChr 12: 17.22 – 17.23 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Potassium voltage-gated channel subfamily F member 1 is a protein that in humans is encoded by the KCNF1 gene.[5][6] The protein encoded by this gene is a voltage-gated potassium channel subunit.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000162975 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000051726 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Su K, Kyaw H, Fan P, Zeng Z, Shell BK, Carter KC, Li Y (Feb 1998). "Isolation, characterization, and mapping of two human potassium channels". Biochem Biophys Res Commun. 241 (3): 675–81. doi:10.1006/bbrc.1997.7830. PMID 9434767.
  6. ^ a b Gutman GA, Chandy KG, Grissmer S, Lazdunski M, McKinnon D, Pardo LA, Robertson GA, Rudy B, Sanguinetti MC, Stuhmer W, Wang X (Dec 2005). "International Union of Pharmacology. LIII. Nomenclature and molecular relationships of voltage-gated potassium channels". Pharmacol Rev. 57 (4): 473–508. doi:10.1124/pr.57.4.10. PMID 16382104. S2CID 219195192.

Further reading

  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ottschytsch N, Raes A, Van Hoorick D, Snyders DJ (2002). "Obligatory heterotetramerization of three previously uncharacterized Kv channel alpha-subunits identified in the human genome". Proc. Natl. Acad. Sci. U.S.A. 99 (12): 7986–91. Bibcode:2002PNAS...99.7986O. doi:10.1073/pnas.122617999. PMC 123007. PMID 12060745.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.

External links

  • v
  • t
  • e
Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl: Chloride channel
H+: Proton channel
M+: CNG cation channel
M+: TRP cation channel
H2O (+ solutes): Porin
Cytoplasm: Gap junction
By gating mechanism
Ion channel class
see also disorders


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