LANCL1

Protein-coding gene in the species Homo sapiens
LANCL1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3E6U, 3E73

Identifiers
AliasesLANCL1, GPR69A, p40, LanC like 1
External IDsOMIM: 604155 MGI: 1336997 HomoloGene: 4417 GeneCards: LANCL1
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for LANCL1
Genomic location for LANCL1
Band2q34Start210,431,249 bp[1]
End210,477,652 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for LANCL1
Genomic location for LANCL1
Band1|1 C3Start67,039,676 bp[2]
End67,078,031 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • corpus callosum

  • inferior ganglion of vagus nerve

  • subthalamic nucleus

  • inferior olivary nucleus

  • Brodmann area 46

  • postcentral gyrus

  • external globus pallidus

  • middle temporal gyrus

  • Brodmann area 23
Top expressed in
  • seminiferous tubule

  • spermatid

  • spermatocyte

  • corneal stroma

  • facial motor nucleus

  • anterior horn of spinal cord

  • barrel cortex

  • cingulate gyrus

  • olfactory tubercle

  • amygdala
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • SH3 domain binding
  • low-density lipoprotein particle receptor binding
  • zinc ion binding
  • protein binding
  • G protein-coupled receptor activity
  • metal ion binding
  • glutathione binding
  • catalytic activity
  • glutathione transferase activity
  • transferase activity
Cellular component
  • cytoplasm
  • integral component of plasma membrane
  • membrane
  • plasma membrane
Biological process
  • G protein-coupled receptor signaling pathway
  • regulation of neuron apoptotic process
  • regulation of oxidative stress-induced neuron death
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10314

14768

Ensembl

ENSG00000115365

ENSMUSG00000026000

UniProt

O43813

O89112

RefSeq (mRNA)

NM_001136574
NM_001136575
NM_006055

NM_001190984
NM_001190985
NM_021295

RefSeq (protein)

NP_001130046
NP_001130047
NP_006046

NP_001177913
NP_001177914
NP_067270

Location (UCSC)Chr 2: 210.43 – 210.48 MbChr 1: 67.04 – 67.08 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

LanC like 1 is a protein that in humans is encoded by the LANCL1 gene. [5]

Function

This gene encodes a loosely associated peripheral membrane protein related to the LanC family of bacterial membrane-associated proteins involved in the biosynthesis of antimicrobial peptides. This protein may play a role as a peptide-modifying enzyme component in eukaryotic cells. Previously considered a member of the G-protein-coupled receptor superfamily, this protein is now in the LanC family. Multiple alternatively spliced variants, encoding the same protein, have been identified.

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000115365 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026000 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: LanC like 1". Retrieved 2016-04-20.

Further reading

  • Zhang W, Wang L, Liu Y, Xu J, Zhu G, Cang H, Li X, Bartlam M, Hensley K, Li G, Rao Z, Zhang XC (2009). "Structure of human lanthionine synthetase C-like protein 1 and its interaction with Eps8 and glutathione". Genes Dev. 23 (12): 1387–92. doi:10.1101/gad.1789209. PMC 2701572. PMID 19528316.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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