Microbacteriaceae
Family of bacteria
| Microbacteriaceae | |
|---|---|
 | |
| Microbacterium gubbeenense on agar plate | |
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Actinomycetota |
| Class: | Actinomycetia |
| Order: | Micrococcales |
| Family: | Microbacteriaceae Park et al. 1995[1] |
| Type genus | |
| Microbacterium Orla-Jensen 1919 (Approved Lists 1980) | |
| Genera | |
| See text. | |
Microbacteriaceae is a family of bacteria of the order Actinomycetales.[1] They are Gram-positive soil organisms.
Genera
The family Microbacteriaceae comprises the following genera:[2]
- Agreia Evtushenko et al. 2001
- Agrococcus Groth et al. 1996
- Agromyces Gledhill and Casida 1969 (Approved Lists 1980)
- Allohumibacter Kim et al. 2016
- Alpinimonas Schumann et al. 2012
- Amnibacterium Kim and Lee 2011
- Arenivirga Hamada et al. 2017
- Aurantimicrobium Nakai et al. 2015
- Canibacter Aravena-Román et al. 2014
- Clavibacter Davis et al. 1984
- Cnuibacter Zhou et al. 2016
- Compostimonas Kim et al. 2012
- Conyzicola Kim et al. 2014
- "Crocebacterium" Rogers & Doran-Peterson 2006
- Cryobacterium Suzuki et al. 1997
- "Cryocola" Gavrish et al. 2003
- Curtobacterium Yamada and Komagata 1972 (Approved Lists 1980)
- Diaminobutyricibacter Kim et al. 2014
- Diaminobutyricimonas Jang et al. 2013
- Frigoribacterium Kämpfer et al. 2000
- Frondihabitans Greene et al. 2009
- Galbitalea Kim et al. 2014
- Glaciibacter Katayama et al. 2009
- Glaciihabitans Li et al. 2014
- Gryllotalpicola Kim et al. 2012
- Gulosibacter Manaia et al. 2004
- Herbiconiux Behrendt et al. 2011
- Homoserinibacter Kim et al. 2014
- Homoserinimonas Kim et al. 2012
- Huakuichenia Zhang et al. 2016
- Humibacter Vaz-Moreira et al. 2008
- Klugiella Cook et al. 2008
- Labedella Lee 2007
- Lacisediminihabitans Zhuo et al. 2020
- Leifsonia Evtushenko et al. 2000
- Leucobacter Takeuchi et al. 1996
- "Luethyella" O'Neal et al. 2017
- "Candidatus Lumbricidiphila" corrig. Lund et al. 2018
- Lysinibacter Tuo et al. 2015
- Lysinimonas Jang et al. 2013
- "Marinisubtilis" Qin et al. 2021
- Marisediminicola Li et al. 2010
- Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
- Microcella Tiago et al. 2005
- Microterricola Matsumoto et al. 2008
- Mycetocola Tsukamoto et al. 2001
- Naasia Weon et al. 2013
- Okibacterium Evtushenko et al. 2002
- Parafrigoribacterium Kong et al. 2016
- Planctomonas Liu et al. 2019
- "Candidatus Planktoluna" Hahn 2009
- Plantibacter Behrendt et al. 2002
- Pontimonas Jang et al. 2013
- Protaetiibacter Heo et al. 2019
- Pseudoclavibacter Manaia et al. 2004
- Pseudolysinimonas Heo et al. 2019
- Puzihella Sheu et al. 2017
- Rathayibacter Zgurskaya et al. 1993
- Rhodoglobus Sheridan et al. 2003
- Rhodoluna Hahn et al. 2014
- Rudaibacter Kim et al. 2013
- Salinibacterium Han et al. 2003
- Schumannella An et al. 2009
- Subtercola Männistö et al. 2000
- Terrimesophilobacter Hahn et al. 2021
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature[2] and the phylogeny is based on whole-genome sequences.[3][a]
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Notes
- ^ Allohumibacter, Alpinimonas, Amnibacterium, Arenivirga, Canibacter, Chryseoglobus, Compostimonas, Conyzicola, Diaminobutyricibacter, Diaminobutyricimonas, Frigoribacterium, Frondihabitans, Galbitalea, Glaciihabitans, Homoserinibacter, Homoserinimonas, Huakuichenia, Klugiella, Labedella, Lacisediminihabitans, Lysinibacter, Lysinimonas, Marisediminicola, Microcella, Naasia, Parafrigoribacterium, Planctomonas, Pontimonas, Protaetiibacter, Pseudolysinimonas, Puzihella, Rhodoglobus, Rudaibacter, Schumannella, and Subtercola are not included in this phylogenetic tree.
References
- ^ a b Park YH, Suzuki K, Yim DG, Lee KC, Kim E, Yoon J, Kim S, Kho YH, Goodfellow M, Komagata K (1993). "Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA". Antonie van Leeuwenhoek. 64 (3–4): 307–313. doi:10.1007/BF00873089. PMID 8085792. S2CID 32811031.
- ^ a b Euzéby JP, Parte AC. "Microbacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 28, 2022.
- ^ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
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Prokaryotes: Bacteria classification
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi)
BV1, BV3, BV5
| others |
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| Cyanoprokaryota |
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| Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
| Synergistetes |
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|---|---|
| Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
| Clade 1 |
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| Clade 2 |
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| Spirochaeto bacteriobiontes |
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| PVC group (Planctobacteria) |
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| FCB group (Sphingobacteria) |
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| Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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