NEUROD2

Protein-coding gene in the species Homo sapiens
NEUROD2
Identifiers
AliasesNEUROD2, NDRF, bHLHa1, neuronal differentiation 2, EIEE72, DEE72
External IDsOMIM: 601725 MGI: 107755 HomoloGene: 4489 GeneCards: NEUROD2
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for NEUROD2
Genomic location for NEUROD2
Band17q12Start39,603,536 bp[1]
End39,609,777 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for NEUROD2
Genomic location for NEUROD2
Band11 D|11 61.75 cMStart98,216,241 bp[2]
End98,220,474 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • cingulate gyrus

  • Brodmann area 9

  • hippocampus proper

  • prefrontal cortex

  • superior frontal gyrus

  • postcentral gyrus

  • cerebellar vermis

  • sural nerve

  • amygdala
Top expressed in
  • entorhinal cortex

  • cerebellar cortex

  • superior frontal gyrus

  • Region I of hippocampus proper

  • hippocampus proper

  • ganglionic eminence

  • prefrontal cortex

  • primary motor cortex

  • condyle

  • cerebellar vermis
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding
  • protein dimerization activity
  • transcription corepressor activity
  • DNA-binding transcription factor activity
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • E-box binding
  • protein heterodimerization activity
  • DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component
  • nucleus
Biological process
  • cellular response to calcium ion
  • regulation of neuron differentiation
  • cell differentiation
  • negative regulation of nucleic acid-templated transcription
  • positive regulation of calcium-mediated signaling
  • associative learning
  • regulation of transcription, DNA-templated
  • regulation of transcription by RNA polymerase II
  • positive regulation of DNA-binding transcription factor activity
  • neuron development
  • transcription by RNA polymerase II
  • behavioral fear response
  • transcription, DNA-templated
  • nervous system development
  • positive regulation of synaptic plasticity
  • negative regulation of synapse maturation
  • multicellular organism development
  • positive regulation of synapse maturation
  • protein ubiquitination
  • positive regulation of neuron differentiation
  • cerebellar cortex development
  • regulation of synapse maturation
  • positive regulation of transcription by RNA polymerase II
  • cellular response to electrical stimulus
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4761

18013

Ensembl

ENSG00000171532

ENSMUSG00000038255

UniProt

Q15784

Q62414

RefSeq (mRNA)

NM_006160

NM_010895

RefSeq (protein)

NP_006151

NP_035025

Location (UCSC)Chr 17: 39.6 – 39.61 MbChr 11: 98.22 – 98.22 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Neurogenic differentiation factor 2 is a protein that in humans is encoded by the NEUROD2 gene.[5][6]

Function

This gene encodes a member of the neuroD family of neurogenic basic helix-loop-helix (bHLH) proteins. Expression of this gene can induce transcription from neuron-specific promoters, such as the GAP-43 promoter, which contain a specific DNA sequence known as an E-box. The product of the human gene can induce neurogenic differentiation in non-neuronal cells in Xenopus embryos, and is thought to play a role in the determination and maintenance of neuronal cell fates.[6]

Interactions

NEUROD2 has been shown to interact with Protein kinase N1.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000171532 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038255 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Tamimi RM, Steingrimsson E, Montgomery-Dyer K, Copeland NG, Jenkins NA, Tapscott SJ (Mar 1997). "NEUROD2 and NEUROD3 genes map to human chromosomes 17q12 and 5q23-q31 and mouse chromosomes 11 and 13, respectively". Genomics. 40 (2): 355–7. doi:10.1006/geno.1996.4578. PMID 9119405.
  6. ^ a b "Entrez Gene: NEUROD2 neurogenic differentiation 2".
  7. ^ Shibata H, Oda H, Mukai H, Oishi K, Misaki K, Ohkubo H, Ono Y (Dec 1999). "Interaction of PKN with a neuron-specific basic helix-loop-helix transcription factor, NDRF/NeuroD2". Brain Research. Molecular Brain Research. 74 (1–2): 126–34. doi:10.1016/S0169-328X(99)00273-9. PMID 10640683.

Further reading

  • McCormick MB, Tamimi RM, Snider L, Asakura A, Bergstrom D, Tapscott SJ (Oct 1996). "NeuroD2 and neuroD3: distinct expression patterns and transcriptional activation potentials within the neuroD gene family". Molecular and Cellular Biology. 16 (10): 5792–800. doi:10.1128/mcb.16.10.5792. PMC 231580. PMID 8816493.
  • Kume H, Maruyama K, Shinozaki K, Kuzume H, Obata K (Sep 1998). "Phosphorylation and spatiotemporal distribution of KW8 (NDRF/NeuroD2), a NeuroD family basic helix-loop-helix protein". Brain Research. Molecular Brain Research. 60 (1): 107–14. doi:10.1016/S0169-328X(98)00176-4. PMID 9748526.
  • Kitamura T, Miyachi T, Nakamura S, Kawakami H (Apr 1999). "Identification and analysis of the promoter region of the human NeuroD-related factor (NDRF)1". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1445 (1): 142–7. doi:10.1016/s0167-4781(99)00038-x. PMID 10209266.
  • Shibata H, Oda H, Mukai H, Oishi K, Misaki K, Ohkubo H, Ono Y (Dec 1999). "Interaction of PKN with a neuron-specific basic helix-loop-helix transcription factor, NDRF/NeuroD2". Brain Research. Molecular Brain Research. 74 (1–2): 126–34. doi:10.1016/S0169-328X(99)00273-9. PMID 10640683.
  • Cousin P, Billotte J, Chaubert P, Shaw P (Jan 2000). "Physical map of 17p13 and the genes adjacent to p53". Genomics. 63 (1): 60–8. doi:10.1006/geno.1999.6062. PMID 10662545.
  • Franklin A, Kao A, Tapscott S, Unis A (Nov 2001). "NeuroD homologue expression during cortical development in the human brain". Journal of Child Neurology. 16 (11): 849–53. doi:10.1177/08830738010160111201. PMID 11732772. S2CID 20069074.
  • Westerman BA, Poutsma A, Maruyama K, Schrijnemakers HF, van Wijk IJ, Oudejans CB (Apr 2002). "The proneural genes NEUROD1 and NEUROD2 are expressed during human trophoblast invasion". Mechanisms of Development. 113 (1): 85–90. doi:10.1016/S0925-4773(01)00665-7. PMID 11900979. S2CID 11607202.
  • Westerman BA, Chhatta A, Poutsma A, van Vegchel T, Oudejans CB (Jan 2004). "NEUROD1 acts in vitro as an upstream regulator of NEUROD2 in trophoblast cells". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1676 (1): 96–103. doi:10.1016/j.bbaexp.2003.10.002. PMID 14732494.
  • Zill P, Büttner A, Eisenmenger W, Bondy B (Jun 2006). "A possible impact of the neuroD2 transcription factor on the development of drug abusing behavior". Molecular Psychiatry. 11 (6): 525–7. doi:10.1038/sj.mp.4001825. PMID 16607387. S2CID 7713810.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
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