SPATS2L

Human protein
SPATS2L
Identifiers
AliasesSPATS2L, DNAPTP6, SGNP, spermatogenesis associated serine rich 2 like
External IDsOMIM: 613817 MGI: 1914448 HomoloGene: 56711 GeneCards: SPATS2L
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for SPATS2L
Genomic location for SPATS2L
Band2q33.1Start200,305,881 bp[1]
End200,482,264 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for SPATS2L
Genomic location for SPATS2L
Band1|1 C1.3Start57,813,321 bp[2]
End57,987,553 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • pancreatic ductal cell

  • parotid gland

  • metanephric glomerulus

  • gallbladder

  • tibia

  • stromal cell of endometrium

  • germinal epithelium

  • seminal vesicula

  • rectum

  • islet of Langerhans
Top expressed in
  • mucous cell of stomach

  • condyle

  • dermis

  • pyloric antrum

  • fossa

  • atrium

  • yolk sac

  • belly cord

  • internal carotid artery

  • atrioventricular valve
More reference expression data
BioGPS
More reference expression data
Orthologs
SpeciesHumanMouse
Entrez

26010

67198

Ensembl

ENSG00000196141

ENSMUSG00000038305

UniProt

Q9NUQ6

Q91WJ7

RefSeq (mRNA)
NM_001100422
NM_001100423
NM_001100424
NM_001282735
NM_001282743

NM_001282744
NM_015535

NM_001164566
NM_144882
NM_001368787

RefSeq (protein)
NP_001093892
NP_001093893
NP_001093894
NP_001269664
NP_001269672

NP_001269673
NP_056350

NP_001158038
NP_659131
NP_001355716

Location (UCSC)Chr 2: 200.31 – 200.48 MbChr 1: 57.81 – 57.99 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

SPATS2-like protein (spermatogenesis associated, serine-rich 2-like protein) or DNAPTP6 (DNA polymerase transactivated protein 6) is a protein that in humans is encoded by the SPATS2L gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000196141 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038305 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Bocher M, Blocker H, Bauersachs S, Blum H, Lauber J, Dusterhoft A, Beyer A, Kohrer K, Strack N, Mewes HW, Ottenwalder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (Mar 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  6. ^ "Entrez Gene: DNAPTP6 DNA polymerase-transactivated protein 6".

Further reading

  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


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