TLX2

Human protein-coding gene
TLX2
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3A03

Identifiers
AliasesTLX2, HOX11L1, NCX, T-cell leukemia homeobox 2, T cell leukemia homeobox 2
External IDsOMIM: 604240 MGI: 1350935 HomoloGene: 7575 GeneCards: TLX2
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for TLX2
Genomic location for TLX2
Band2p13.1Start74,513,463 bp[1]
End74,517,148 bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for TLX2
Genomic location for TLX2
Band6 C3|6 35.94 cMStart83,045,305 bp[2]
End83,047,274 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • transverse colon

  • rectum

  • duodenum

  • appendix

  • gastric mucosa

  • frontal lobe

  • prefrontal cortex

  • Brodmann area 9

  • body of stomach

  • fundus
Top expressed in
  • adrenal medulla

  • autonomic nervous system

  • parasympathetic nervous system

  • female urethra

  • male urethra

  • autonomic ganglion

  • sympathetic nervous system

  • enteric nervous system

  • stellate ganglion

  • Greater petrosal nerve
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • DNA binding
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • sequence-specific DNA binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
  • DNA-binding transcription factor activity
Cellular component
  • cytoplasm
  • nucleus
  • cellular component
Biological process
  • multicellular organism development
  • enteric nervous system development
  • mesoderm formation
  • regulation of transcription, DNA-templated
  • negative regulation of dendrite morphogenesis
  • transcription, DNA-templated
  • transcription by RNA polymerase II
  • positive regulation of transcription by RNA polymerase II
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3196

21909

Ensembl

ENSG00000115297

ENSMUSG00000068327

UniProt

O43763

Q61663

RefSeq (mRNA)

NM_016170
NM_001534

NM_009392

RefSeq (protein)

NP_057254

NP_033418

Location (UCSC)Chr 2: 74.51 – 74.52 MbChr 6: 83.05 – 83.05 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

T-cell leukemia homeobox protein 2 is a protein that in humans is encoded by the TLX2 gene.[5][6]

Interactions

TLX2 has been shown to interact with YWHAH.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000115297 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000068327 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Puliti A, Cinti R, Betsos N, Romeo G, Ceccherini I (Jun 1999). "HOX11L1, a gene involved in peripheral nervous system development, maps to human chromosome 2p13.1→p12 and mouse chromosome 6C3-D1". Cytogenetics and Cell Genetics. 84 (1–2): 115–7. doi:10.1159/000015234. PMID 10343123. S2CID 21498122.
  6. ^ "Entrez Gene: TLX2 T-cell leukemia homeobox 2".
  7. ^ Tang SJ, Suen TC, McInnes RR, Buchwald M (September 1998). "Association of the TLX-2 homeodomain and 14-3-3eta signaling proteins". The Journal of Biological Chemistry. 273 (39): 25356–63. doi:10.1074/jbc.273.39.25356. PMID 9738002.

Further reading

  • Kaifi JT, Wagner M, Schurr PG, Wachowiak R, Reichelt U, Yekebas EF, Mann O, Vashist Y, Kleinhans H, Link BC, Strate T, Kalinin V, Izbicki JR (October 2006). "Allelic loss of Hox11L1 gene locus predicts outcome of gastrointestinal stromal tumors". Oncology Reports. 16 (4): 915–9. doi:10.3892/or.16.4.915. PMID 16969514.
  • Borghini S, Bachetti T, Fava M, Di Duca M, Cargnin F, Fornasari D, Ravazzolo R, Ceccherini I (April 2006). "The TLX2 homeobox gene is a transcriptional target of PHOX2B in neural-crest-derived cells". The Biochemical Journal. 395 (2): 355–61. doi:10.1042/BJ20051386. PMC 1422762. PMID 16402914.
  • Parisi MA, Lipman NS, Clarke CM, Taylor B, Kapur RP (November 2005). "Evaluation of Hox11L1 in the fmc/fmc rat model of chronic intestinal pseudo-obstruction". Journal of Pediatric Surgery. 40 (11): 1760–5. doi:10.1016/j.jpedsurg.2005.07.010. PMID 16291166.
  • Iitsuka Y, Shimizu H, Kang MM, Sasagawa K, Sekiya S, Tokuhisa T, Hatano M (August 1999). "An enhancer element for expression of the Ncx (Enx, Hox11L1) gene in neural crest-derived cells". The Journal of Biological Chemistry. 274 (34): 24401–7. doi:10.1074/jbc.274.34.24401. PMID 10446220.
  • Tang SJ, Suen TC, McInnes RR, Buchwald M (September 1998). "Association of the TLX-2 homeodomain and 14-3-3eta signaling proteins". The Journal of Biological Chemistry. 273 (39): 25356–63. doi:10.1074/jbc.273.39.25356. PMID 9738002.
  • v
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(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
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