ZNF366

Protein-coding gene in the species Homo sapiens
ZNF366
Identifiers
AliasesZNF366, DCSCRIPT, zinc finger protein 366, DC-SCRIPT
External IDsOMIM: 610159 MGI: 2178429 HomoloGene: 17637 GeneCards: ZNF366
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for ZNF366
Genomic location for ZNF366
Band5q13.2|5q13.2Start72,439,903 bp[1]
End72,507,410 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for ZNF366
Genomic location for ZNF366
Band13|13 D1Start99,321,331 bp[2]
End99,387,164 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • smooth muscle tissue

  • appendix

  • left ventricle

  • lymph node

  • subcutaneous adipose tissue

  • muscle of leg

  • monocyte

  • gallbladder

  • gastrocnemius muscle
Top expressed in
  • lung

  • quadriceps femoris muscle

  • muscle tissue

  • spleen

  • skeletal muscle tissue

  • white adipose tissue

  • adrenal gland

  • cerebellum

  • kidney

  • heart
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • DNA binding
  • estrogen receptor binding
  • protein binding
  • transcription corepressor activity
  • metal ion binding
  • nucleic acid binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component
  • nucleus
Biological process
  • negative regulation of transcription by RNA polymerase II
  • negative regulation of intracellular estrogen receptor signaling pathway
  • regulation of transcription, DNA-templated
  • transcription, DNA-templated
  • response to estrogen
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

167465

238803

Ensembl

ENSG00000178175

ENSMUSG00000050919

UniProt

Q8N895

Q6NS86

RefSeq (mRNA)

NM_152625

NM_001004149

RefSeq (protein)

NP_689838

NP_001004149

Location (UCSC)Chr 5: 72.44 – 72.51 MbChr 13: 99.32 – 99.39 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Zinc finger protein 366, also known as DC-SCRIPT (Dendritic cell-specific transcript), is a protein that in humans is encoded by the ZNF366 gene.[5] The ZNF366 gene was first identified in a DNA comparison study between 85 kb of Fugu rubripes sequence containing 17 genes with its homologous loci in the human draft genome.[6]

Function

In 2006, DC-SCRIPT was isolated and characterized in human monocyte-derived dendritic cells (mo-DCs).[7]

DC-SCRIPT contains a DNA-binding domain (11 C2H2 zinc (Zn) fingers), flanked by a proline-rich and an acidic region, which can interact with C-terminal-binding protein 1 (CtBP1), a global corepressor. In the immune system of both mice and humans, DC-SCRIPT was found to be specifically expressed in dendritic cells (DCs).[8]

In COS-1 cells, DC-SCRIPT was shown to interact with the estrogen receptor DNA-binding domain (ERDBD) and represses ER activity through the association with RIP140, CtBP and histone deacetylases.[9]

In DCs, DC-SCRIPT was found to be highly expressed in type one conventional DCs (cDC1s) under the control of PU.1.[10] The presence of DC-SCRIPT is important for the cDC1s lineage specification via maintaining Interferon regulatory factor 8 (IRF8) expression. The DC-SCRIPT deficient cDC1s had impaired capacity to capture and present cell-associated antigens and to secrete IL-12p40.[11]

Breast cancer

In 2010, it was shown that DC-SCRIPT can act as a coregulator of multiple nuclear receptors having opposite effects on type I vs type II NRs. DC-SCRIPT is able to repress ER and PR mediated transcription, whereas it can activate transcription mediated by RAR and PPAR. In the same study, it was shown that breast tumor tissue expresses lower levels of DC-SCRIPT than normal breast tissue from the same patient and that DC-SCRIPT mRNA expression is an independent prognostic factor for good survival of breast cancer patients with estrogen receptor- and/or progesterone receptor-positive tumors.[12]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000178175 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000050919 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: ZNF366 zinc finger protein 366".
  6. ^ Gilligan P, Brenner S, Venkatesh B (July 2002). "Fugu and human sequence comparison identifies novel human genes and conserved non-coding sequences". Gene. 294 (1–2): 35–44. doi:10.1016/S0378-1119(02)00793-X. PMID 12234665.
  7. ^ Triantis V, Trancikova DE, Looman MW, Hartgers FC, Janssen RA, Adema GJ (January 2006). "Identification and characterization of DC-SCRIPT, a novel dendritic cell-expressed member of the zinc finger family of transcriptional regulators". Journal of Immunology. 176 (2): 1081–9. doi:10.4049/jimmunol.176.2.1081. PMID 16393996.
  8. ^ Triantis V, Moulin V, Looman MW, Hartgers FC, Janssen RA, Adema GJ (May 2006). "Molecular characterization of the murine homologue of the DC-derived protein DC-SCRIPT". Journal of Leukocyte Biology. 79 (5): 1083–91. doi:10.1189/jlb.1005588. hdl:2066/49437. PMID 16522745. S2CID 27847791.
  9. ^ Lopez-Garcia J, Periyasamy M, Thomas RS, Christian M, Leao M, Jat P, et al. (2006). "ZNF366 is an estrogen receptor corepressor that acts through CtBP and histone deacetylases". Nucleic Acids Research. 34 (21): 6126–36. doi:10.1093/nar/gkl875. PMC 1693901. PMID 17085477.
  10. ^ Chopin M, Lun AT, Zhan Y, Schreuder J, Coughlan H, D'Amico A, et al. (January 2019). "Transcription Factor PU.1 Promotes Conventional Dendritic Cell Identity and Function via Induction of Transcriptional Regulator DC-SCRIPT". Immunity. 50 (1): 77–90.e5. doi:10.1016/j.immuni.2018.11.010. PMID 30611612.
  11. ^ Zhang S, Coughlan HD, Ashayeripanah M, Seizova S, Kueh AJ, Brown DV, et al. (April 2021). "Type 1 conventional dendritic cell fate and function are controlled by DC-SCRIPT". Science Immunology. 6 (58): eabf4432. doi:10.1126/sciimmunol.abf4432. PMID 33811060. S2CID 232771588.
  12. ^ Ansems M, Hontelez S, Looman MW, Karthaus N, Bult P, Bonenkamp JJ, et al. (January 2010). "DC-SCRIPT: nuclear receptor modulation and prognostic significance in primary breast cancer". Journal of the National Cancer Institute. 102 (1): 54–68. doi:10.1093/jnci/djp441. PMID 20008677.

Further reading

  • Hartley JL, Temple GF, Brasch MA (November 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, et al. (March 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Research. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, et al. (October 2004). "From ORFeome to biology: a functional genomics pipeline". Genome Research. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, et al. (January 2006). "The LIFEdb database in 2006". Nucleic Acids Research. 34 (Database issue): D415-8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


  • v
  • t
  • e
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies