S100A5

Protein-coding gene in the species Homo sapiens
S100A5
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2KAX, 2KAY, 4DIR

Identifiers
AliasesS100A5, S100D, S100 calcium binding protein A5
External IDsOMIM: 176991; MGI: 1338915; HomoloGene: 2224; GeneCards: S100A5; OMA:S100A5 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for S100A5
Genomic location for S100A5
Band1q21.3Start153,537,147 bp[1]
End153,541,765 bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for S100A5
Genomic location for S100A5
Band3 F1|3 39.27 cMStart90,515,830 bp[2]
End90,519,087 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • left lobe of thyroid gland

  • right lobe of thyroid gland

  • monocyte

  • gastric mucosa

  • blood

  • left uterine tube

  • rectum

  • skin of abdomen

  • ascending aorta

  • kidney
Top expressed in
  • olfactory epithelium

  • right ventricle

  • olfactory bulb

  • extraocular muscle

  • temporal muscle

  • submandibular gland

  • yolk sac

  • ankle

  • choroid plexus

  • stomach
More reference expression data
BioGPS


More reference expression data
Orthologs
SpeciesHumanMouse
Entrez

6276

20199

Ensembl

ENSG00000196420

ENSMUSG00000001023

UniProt

P33763

P63084

RefSeq (mRNA)

NM_002962
NM_001394232
NM_001394233
NM_001394234

NM_011312

RefSeq (protein)

NP_002953

NP_035442

Location (UCSC)Chr 1: 153.54 – 153.54 MbChr 3: 90.52 – 90.52 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

S100 calcium-binding protein A5 (S100A5) is a protein that is encoded by the S100A5 gene in humans.[5][6]

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells and are involved in the regulation of a number of cellular processes, such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein has a Ca2+ affinity 20- to 100-fold higher than the other S100 proteins studied under identical conditions. This protein also binds Zn2+ and Cu2+, and Cu2+ strongly which impairs the binding of Ca2+. This protein is expressed in very restricted regions of the adult brain.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000196420 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000001023 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Engelkamp D, Schafer BW, Mattei MG, Erne P, Heizmann CW (Aug 1993). "Six S100 genes are clustered on human chromosome 1q21: identification of two genes coding for the two previously unreported calcium-binding proteins S100D and S100E". Proc Natl Acad Sci U S A. 90 (14): 6547–51. Bibcode:1993PNAS...90.6547E. doi:10.1073/pnas.90.14.6547. PMC 46969. PMID 8341667.
  6. ^ a b "Entrez Gene: S100A5 S100 calcium binding protein A5".

Further reading

  • Schäfer BW, Heizmann CW (1996). "The S100 family of EF-hand calcium-binding proteins: functions and pathology". Trends Biochem. Sci. 21 (4): 134–40. doi:10.1016/S0968-0004(96)80167-8. PMID 8701470.
  • Schäfer BW, Wicki R, Engelkamp D, et al. (1995). "Isolation of a YAC clone covering a cluster of nine S100 genes on human chromosome 1q21: rationale for a new nomenclature of the S100 calcium-binding protein family". Genomics. 25 (3): 638–43. doi:10.1016/0888-7543(95)80005-7. PMID 7759097.
  • Ridinger K, Ilg EC, Niggli FK, et al. (1999). "Clustered organization of S100 genes in human and mouse". Biochim. Biophys. Acta. 1448 (2): 254–63. doi:10.1016/S0167-4889(98)00137-2. PMID 9920416.
  • Schäfer BW, Fritschy JM, Murmann P, et al. (2000). "Brain S100A5 is a novel calcium-, zinc-, and copper ion-binding protein of the EF-hand superfamily". J. Biol. Chem. 275 (39): 30623–30. doi:10.1074/jbc.M002260200. PMID 10882717.
  • Bronckart Y, Decaestecker C, Nagy N, et al. (2002). "Development and progression of malignancy in human colon tissues are correlated with expression of specific Ca(2+)-binding S100 proteins". Histol. Histopathol. 16 (3): 707–12. PMID 11510959.
  • Teratani T, Watanabe T, Yamahara K, et al. (2002). "Restricted expression of calcium-binding protein S100A5 in human kidney". Biochem. Biophys. Res. Commun. 291 (3): 623–7. doi:10.1006/bbrc.2002.6494. PMID 11855835.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chan WY, Xia CL, Dong DC, et al. (2003). "Differential expression of S100 proteins in the developing human hippocampus and temporal cortex". Microsc. Res. Tech. 60 (6): 600–13. doi:10.1002/jemt.10302. PMID 12645008. S2CID 13596098.
  • Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315–21. Bibcode:2006Natur.441..315G. doi:10.1038/nature04727. PMID 16710414.


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