TRPM6

Protein-coding gene in the species Homo sapiens
TRPM6
Identifiers
AliasesTRPM6, CHAK2, HMGX, HOMG, HOMG1, HSH, transient receptor potential cation channel subfamily M member 6
External IDsOMIM: 607009 MGI: 2675603 HomoloGene: 9767 GeneCards: TRPM6
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for TRPM6
Genomic location for TRPM6
Band9q21.13Start74,722,495 bp[1]
End74,888,094 bp[1]
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[2]
Chromosome 19 (mouse)
Genomic location for TRPM6
Genomic location for TRPM6
Band19|19 BStart18,727,347 bp[2]
End18,869,875 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • jejunal mucosa

  • rectum

  • hair follicle

  • duodenum

  • corpus callosum

  • blood

  • retinal pigment epithelium

  • bone marrow cells

  • lower lobe of lung

  • inferior ganglion of vagus nerve
Top expressed in
  • conjunctival fornix

  • left colon

  • spermatid

  • right lung lobe

  • seminiferous tubule

  • oocyte

  • secondary oocyte

  • Paneth cell

  • yolk sac

  • blastocyst
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • transferase activity
  • nucleotide binding
  • metal ion binding
  • kinase activity
  • protein serine/threonine kinase activity
  • ion channel activity
  • protein binding
  • cation channel activity
  • ATP binding
  • calcium channel activity
Cellular component
  • integral component of membrane
  • membrane
  • plasma membrane
  • brush border membrane
  • apical plasma membrane
Biological process
  • phosphorylation
  • metal ion transport
  • cation transport
  • ion transport
  • protein tetramerization
  • protein phosphorylation
  • calcium ion transmembrane transport
  • response to toxic substance
  • calcium ion transport
  • transmembrane transport
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

140803

225997

Ensembl

ENSG00000119121

ENSMUSG00000024727

UniProt

Q9BX84

Q8CIR4

RefSeq (mRNA)

NM_001177310
NM_001177311
NM_017662

NM_153417

RefSeq (protein)

NP_001170781
NP_001170782
NP_060132

NP_700466

Location (UCSC)Chr 9: 74.72 – 74.89 MbChr 19: 18.73 – 18.87 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TRPM6 is a transient receptor potential ion channel associated with hypomagnesemia with secondary hypocalcemia.[5]

See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000119121 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000024727 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Schlingmann KP, Weber S, Peters M, et al. (2002). "Hypomagnesemia with secondary hypocalcemia is caused by mutations in TRPM6, a new member of the TRPM gene family". Nat. Genet. 31 (2): 166–70. doi:10.1038/ng889. PMID 12032568. S2CID 40990544.

Further reading

  • Islam, Md. Shahidul (January 2011). Transient Receptor Potential Channels. Advances in Experimental Medicine and Biology. Vol. 704. Berlin: Springer. p. 700. ISBN 978-94-007-0264-6.
  • Chubanov V, Gudermann T, Schlingmann KP (2006). "Essential role for TRPM6 in epithelial magnesium transport and body magnesium homeostasis". Pflügers Arch. 451 (1): 228–34. doi:10.1007/s00424-005-1470-y. PMID 16075242. S2CID 6037803.
  • Clapham DE, Julius D, Montell C, Schultz G (2006). "International Union of Pharmacology. XLIX. Nomenclature and structure-function relationships of transient receptor potential channels". Pharmacol. Rev. 57 (4): 427–50. doi:10.1124/pr.57.4.6. PMID 16382100. S2CID 17936350.
  • Bödding M (2007). "TRPM6: A Janus-like protein". Transient Receptor Potential (TRP) Channels. Handbook of Experimental Pharmacology. Vol. 179. pp. 299–311. doi:10.1007/978-3-540-34891-7_18. ISBN 978-3-540-34889-4. PMID 17217065.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl: Chloride channel
H+: Proton channel
M+: CNG cation channel
M+: TRP cation channel
H2O (+ solutes): Porin
Cytoplasm: Gap junction
By gating mechanism
Ion channel class
see also disorders
  • v
  • t
  • e
TRP channel modulators
TRPA
Activators
Blockers
TRPC
Activators
Blockers
TRPM
Activators
Blockers
TRPML
Activators
Blockers
TRPP
Activators
Blockers
TRPV
Activators
Blockers
See also: Receptor/signaling modulators • Ion channel modulators


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